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View Structure Prediction Details

Protein: CE35492
Organism: Caenorhabditis elegans
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35492.

Description E-value Query
Range
Subject
Range
gi|68404306 - gi|68404306|ref|XP_690331.1| PREDICTED: similar to patched domain containing 1 [Danio rerio]
342.0 [0..1] [480..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVEKMREKF SSPWIALNLL LLMVFLALVT VHIKMTVEVK PVKLDELLSN AADSRNLCES  60
   61 PDCITLSHEL LNYQDPSVDP CVDFFQHACG RFHEQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSVESRTQKK RYILQKQIRE FLHNNKTSTS KSENLMKLVF DKCEALQKSQ NTGYLQEVHE  60
   61 VFNDIKKIGA WPLLDKNWDE SKFDLNEMLT NLVKLGATNF GLFQFNFLGL IMGNFVEIAP 120
  121 TEKSDVEEIQ MVLDILKGNG IEPDREEISR ELEEYSMLEK KLKIVKENET ISLNLILPDV 180
  181 RSVNFSGLIA EMSHPSRVSK LSGMITPKII TNKHPLLFET NGTESLDAII ESTSNRTLAN 240
  241 YLIFNYIQSS RDILTETYEN CEQKVEAIKV IIGYPDHFDP PGTLDKEFEH IDLDSTDSFY 300
  301 RISQKLHRLR TEQQMEFIAG ETPISPVENV LEVSAHYDPS KNALTFLAPF LDDPFFDTTY 360
  361 PDYANLFLSG RIIAHEIGHS VDGTSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.522879
Match: 1dmtA
Description: Neutral endopeptidase (neprilysin)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.361128926739778 bayes_pls_golite062009
hydrolase activity 0.29183147920977 bayes_pls_golite062009
peptidase activity 0.23695590197447 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.0341081586881899 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle