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View Structure Prediction Details

Protein: zfp-3
Organism: Caenorhabditis elegans
Length: 663 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zfp-3.

Description E-value Query
Range
Subject
Range
zfp-3 - status:Confirmed UniProt:Q58AT7 protein_id:AAX55684.1
340.0 [0..1] [663..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVYTPTKT MDGAFLPAVG SPNTSIDSPA VYVPTPLTAP STSKTTPVKP EDQTTRQKYG  60
   61 GSVSYSPSNP GIRIVKRKPK PEAVAAAAAV PTAIYSGKRH ATDDGEDAGL AALKLKPNRG 120
  121 ILRGPAISNL NQRGTRRLIF ADTRGLPLVH VKEIERIAAI HSNVADYRCS ERNEAAAFGQ 180
  181 EMEVFEDVEW SLVPVKRSKP ARS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-663]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EMSESGLREE RRIEEEGIMR GAMFGMCQLE DNPALNEQAA VDRANYTPTI IPTVSVPSEP  60
   61 TTLATIRDLP LPGRPPRVRP QDLLLQVKPN QGFHTLPLYH SQRPENPRRP MYAQQQQQQS 120
  121 AHQTPTPHIQ QVFQETEPVT NYYTATTSVP ETPEPAPAAQ PASRFELPSN LKEMLNQLKK 180
  181 KGFVSSDETP SPTTSAPPPV DPLAAAMQTA QQMMLQQGNT YASEEVPQDY PMDGYVATFA 240
  241 TPEMMAQERR QDSRNSEGWT QSGWKIPEPC VYFISRPGGC NRGDQCRFIH DEEMRRQKMA 300
  301 ELPPRGPNHH HDNFRGGRGR GFRGGYNNRN NYNNHHDRDF RDNAGGNRGR FGDTEGFRGA 360
  361 RYARGGFAPR NNSRFDQKPA YNDDGGHLGS PNAHGSQYQD PVPTKRARVS RFDRQGEDDA 420
  421 PGQDMDQRPP RRNRFDEQPP RRTFRSRFDQ QADHDEMSQA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.30103
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle