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View Structure Prediction Details

Protein: CE34895
Organism: Caenorhabditis elegans
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34895.

Description E-value Query
Range
Subject
Range
gi|39588444, gi|... - gi|39588444|emb|CAE72795.1| Hypothetical protein CBG20070 [Caenorhabditis briggsae], gi|187023820|em...
gi|157757423 - gi|157757423|ref|XP_001671055.1| Hypothetical protein CBG20070 [Caenorhabditis briggsae AF16]
163.0 [0..37] [198..1]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVGHQIFS LLSFTLFSHF IFGNPFLILH FSVPVKMALP SSEGLRKRKD SLSDEFDSDL  60
   61 DDNEMKAIVS DIEQDKLHD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETPDTRWIQF KNHLKNWGET ATIHGVPHMA QAHTVIAIIV WSIILIVSAV AFVYMFYSIA  60
   61 ASYLAFNVVV NLNTGLDSEP FPSITFCNTN PYKLSEMVNV PELNALLTVY QASADGSLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 2qtsA
Description: No description for 2qtsA was found.

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