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View Structure Prediction Details

Protein: CE34895
Organism: Caenorhabditis elegans
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34895.

Description E-value Query
Range
Subject
Range
gi|39588444, gi|... - gi|39588444|emb|CAE72795.1| Hypothetical protein CBG20070 [Caenorhabditis briggsae], gi|187023820|em...
gi|157757423 - gi|157757423|ref|XP_001671055.1| Hypothetical protein CBG20070 [Caenorhabditis briggsae AF16]
163.0 [0..37] [198..1]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVGHQIFS LLSFTLFSHF IFGNPFLILH FSVPVKMALP SSEGLRKRKD SLSDEFDSDL  60
   61 DDNEMKAIVS DIEQDKLHD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETPDTRWIQF KNHLKNWGET ATIHGVPHMA QAHTVIAIIV WSIILIVSAV AFVYMFYSIA  60
   61 ASYLAFNVVV NLNTGLDSEP FPSITFCNTN PYKLSEMVNV PELNALLTVY QASADGSLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 2qtsA
Description: No description for 2qtsA was found.

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