| Protein: | tsg-101 |
| Organism: | Caenorhabditis elegans |
| Length: | 425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tsg-101.
| Description | E-value | Query Range |
Subject Range |
|
|
417.0 | [0..2] | [424..377] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MSAHQVQQCL QRAGGKYADS AKKDIIGALS QFKDLSPGTD TFMFPDGKRR TAFRLKGTIP 60
61 VYYKGACYNI PVTVYLWDTH PYYAPICYVN PTSTMVIKES EHVNKEGKVF LPYLNEWRFP 120
121 GYDLSGLLQV MAMVFQEKCP V
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 1kppA |
| Description: | Tumor susceptibility gene 101 (TSG101) UEV domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 0.45543793305446 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.181948894099648 | bayes_pls_golite062009 |
| protein binding | 0.030781579956521 | bayes_pls_golite062009 |
|
Region A: Residues: [142-268] |
1 11 21 31 41 51
| | | | | |
1 FARSAANSAT NASATNPSAG SSASSTPTPY PSSQPTMPTP YPTGSGAAPY PPSSTPYPSA 60
61 GAMGYNPYMN VPQSTPYPMG ASGASPYPSA SSNPAPPPPR PPPVTAQTSV SSSSGGTIQA 120
121 DTIRASV
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [269-425] |
1 11 21 31 41 51
| | | | | |
1 MSAVEEKIRA KLRERMGTNS AEMASIRTTS DELREGQQKL KRMLEELETQ RSSLQTACEI 60
61 YTAKKAELAK ALSDAGGTDA PPIDEAIDAA FPLHRQIVLN YAKDLTCDDV IYSLGQSLKK 120
121 RQITLAEYLR HVRDVSREQF IYRATMQKCR RTAGLPI
|
| Detection Method: | |
| Confidence: | 34.0 |
| Match: | 2p22A |
| Description: | No description for 2p22A was found. |
