| Protein: | CE34664 |
| Organism: | Caenorhabditis elegans |
| Length: | 635 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MRTILFFGIF FIFIFQCAKC IELKIFEDLL EVRSQSGLFF PLCSKSFHQK YGEQACASIS 60
61 STFLSYSTVS LQQYTYSVGC TTSVCFTFLS SFCKTGVKVF CSP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [104-471] |
1 11 21 31 41 51
| | | | | |
1 SLCASGTLQI GSKCLSISTV PVQGYSEANY YCNPATLISS LKPTEIESIR DTILPTFADT 60
61 RLFLTSGLRQ GATWKWGNGD TVEQEVTGTG RCLALQAGNL VAIDCDSEAY VFCESGRECI 120
121 ARDKEYSGTA NRTSDGKMCL MWNDPTVLFR RERDLEILNH NFCRFVNDAD GKKSATPVCY 180
181 TKPNELSQCY IPPCPESFND VVPIESGDSC PIGSISCDNG SKCISEKFQC DYEVDCNDGS 240
241 DEHNCEDYLQ YYELIGAYRL ADNIIEVWTF IPHVQGCARK CRESLLMCEA FSYEPKSQTC 300
301 LLTDTSQTFS SLARKITSLY YRRRFSTKDV EFQVENKVLY ATKSAKKGHV CDDNYSREKL 360
361 SSICRVLG
|
| Detection Method: | |
| Confidence: | 32.221849 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
|
Region A: Residues: [472-518] |
1 11 21 31 41 51
| | | | | |
1 FGDPIYTVES HQSESSLGPL QPTTLHPTNP SFDSPSSVSQ MRRTSPS
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [519-635] |
1 11 21 31 41 51
| | | | | |
1 ATLAPRLPAW NLSCLREPNC TSTVISTCEP IRCSHCQQAA CGDGSCIRFD QLCNGQIDCQ 60
61 SGEDEDYCRA NSFRLTNGSD TSGYLEVLFR SRWEPICADH LNGKISNSIC DAMRLGK
|
| Detection Method: | |
| Confidence: | 2.3 |
| Match: | 2gtlN |
| Description: | No description for 2gtlN was found. |
