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View Structure Prediction Details

Protein: CE34631
Organism: Caenorhabditis elegans
Length: 484 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34631.

Description E-value Query
Range
Subject
Range
gi|115402325, gi... - gi|115402325|ref|XP_001217239.1| hypothetical protein ATEG_08653 [Aspergillus terreus NIH2624], gi|1...
295.0 [0..35] [479..41]

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Predicted Domain #1
Region A:
Residues: [1-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVRWAPSDG SLGDYTYQQD MSSSDKLSAD DVLNTLDKSN RHILTCILVC GLAWSPLAFT  60
   61 GLCPSFVVKA SENSSFIGVA DEFDLTGDAS WLAESTTTFY MVGNMIGGMF IPPLADHYGR 120
  121 LPVFVATVLL MAVGGMISAF STSIMMFCIM RMIHGIFYTA AGLAGWVLGY ENTPLRLRFF 180
  181 TSVYFGVMWV VGACFLGLLA YILPDWRYLM FCISVPNIFV ALLIYMTVPE SLHFLVSSQQ 240
  241 NEKIEAWLEK IRGPKGDISA SDIVEDRDEN GSSFKTLCRE MWKHKMFIVY VLVMTYIWIV 300
  301 DTFIYFGLAF YSTNLAGNLY LNFVLMSLVE APAYIFSPIF MNKYGRKVLI SGTHIIAGLS 360
  361 FLGIVLSSEA WHIHFWLLGK FAISCSFMSI YMFASEIFPT DGRNKCIGFC ETLSRFGGML 420
  421 SPYLSHLTAV HALAPAITLS LIAVSGGLLT LILPETLNTK LPSTIAETAS RRQLIDDKSD 480
  481 SSSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
substrate-specific transmembrane transporter activity 5.21742729128468 bayes_pls_golite062009
ion transmembrane transporter activity 4.31748220369305 bayes_pls_golite062009
transporter activity 4.09176719149278 bayes_pls_golite062009
anion transmembrane transporter activity 3.74166040263114 bayes_pls_golite062009
cation transmembrane transporter activity 3.60627834007397 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transporter activity 3.3426261924492 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 3.21476253433572 bayes_pls_golite062009
organic anion transmembrane transporter activity 2.98462343619844 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
phosphate transmembrane transporter activity 1.47932844880848 bayes_pls_golite062009
binding 1.44517555335932 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
cation:sugar symporter activity 0.143419068761182 bayes_pls_golite062009
sugar:hydrogen symporter activity 0.143419068761182 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle