| Protein: | ztf-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ztf-4.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..2] | [339..230] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MSAEYGQYGY YGGAGGAQTT TTPAAALAAS IPATSVYGEQ RPTFSEDGTG APYSTILNLV 60
61 GSAAVNSDIS YDTSSKDPHM IRARVFIGNI ARAIITRDDI IELFRPFGKI IAVNYFAQQG 120
121 FGFVQFNEAG SADESCRSLN GMSWKACCLD VHLAMLGS
|
| Detection Method: |  |
| Confidence: | 26.30103 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [159-280] |
1 11 21 31 41 51
| | | | | |
1 LRKPTGNEGR QGNTIAPAPL PVGKPLTQHA VDTSAQSAKR PYEDEEYEIF KQNKRNKQFA 60
61 NGDTTINEQL APNEMCDTMV CGYCRFVTSD FEEFKEHRIA GCNKYKDPEE PRHRLKCATC 120
121 SQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [281-367] |
1 11 21 31 41 51
| | | | | |
1 RFLGAWGLLE HLTDFHRMLL YTEEKMTPND LAQMRGGSVS TPSSIPETPA SGSAAPAAPN 60
61 SANSTPSHHI VEGAPLSYSS NNGTPQI
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
|
