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Protein Overview: ztf-4

General Information:
Name(s) found: ztf-4 / CE34364 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00020399 locus:ztf-4 status:Confirmed UniProt:Q9TZI2 protein_id:CCD66241.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEYGQYGY YGGAGGAQTT TTPAAALAAS IPATSVYGEQ RPTFSEDGTG APYSTILNLV  60
   61 GSAAVNSDIS YDTSSKDPHM IRARVFIGNI ARAIITRDDI IELFRPFGKI IAVNYFAQQG 120
  121 FGFVQFNEAG SADESCRSLN GMSWKACCLD VHLAMLGSLR KPTGNEGRQG NTIAPAPLPV 180
  181 GKPLTQHAVD TSAQSAKRPY EDEEYEIFKQ NKRNKQFANG DTTINEQLAP NEMCDTMVCG 240
  241 YCRFVTSDFE EFKEHRIAGC NKYKDPEEPR HRLKCATCSQ RFLGAWGLLE HLTDFHRMLL 300
  301 YTEEKMTPND LAQMRGGSVS TPSSIPETPA SGSAAPAAPN SANSTPSHHI VEGAPLSYSS 360
  361 NNGTPQI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 26.30103 Poly(A)-binding protein
    2 View Details [159..280] deduced N/A No confident structure predictions are available.
    3 View Details [281..367] PSI-BLAST 6.30103 poly(A) binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle