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View Structure Prediction Details

Protein: phy-3
Organism: Caenorhabditis elegans
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phy-3.

Description E-value Query
Range
Subject
Range
gi|109488103 - gi|109488103|ref|XP_340799.3| PREDICTED: similar to Prolyl 4-hydroxylase alpha-2 subunit precursor (...
272.0 [0..12] [293..382]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVTFRQIL GLVSLLCATW LYSQCRHIWL LAQDDFNEQF TNFLGEKWWS TDQLELCDDE  60
   61 TKDTKWQKND SICITYVYNM LPVDMEIISW 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APTLVIYRNL MSPRQTASFL NFIEQRDLEI QKTSDFGTSI ETTHRRANGS FIPPEDSNVT  60
   61 VEIKMQAQKR IPGLNLTVAE HFSALSYLPG GHYAVHYDYL DYRSKQDYDW WMNKTGNRIG 120
  121 TLIFVLKPAE KGGGTVFPSI GSTVRANAGD AFFWFNAQAD EEKEMLSNHG GCPIYEGRKV 180
  181 IATIWIRAYN QRILPMAPAG SSIHASWLIP SLSNRFRPEM QTQSPVPN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.75
Match: 2hbtA
Description: No description for 2hbtA was found.

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