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View Structure Prediction Details

Protein: phy-3
Organism: Caenorhabditis elegans
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phy-3.

Description E-value Query
Range
Subject
Range
gi|109488103 - gi|109488103|ref|XP_340799.3| PREDICTED: similar to Prolyl 4-hydroxylase alpha-2 subunit precursor (...
272.0 [0..12] [293..382]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVTFRQIL GLVSLLCATW LYSQCRHIWL LAQDDFNEQF TNFLGEKWWS TDQLELCDDE  60
   61 TKDTKWQKND SICITYVYNM LPVDMEIISW 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APTLVIYRNL MSPRQTASFL NFIEQRDLEI QKTSDFGTSI ETTHRRANGS FIPPEDSNVT  60
   61 VEIKMQAQKR IPGLNLTVAE HFSALSYLPG GHYAVHYDYL DYRSKQDYDW WMNKTGNRIG 120
  121 TLIFVLKPAE KGGGTVFPSI GSTVRANAGD AFFWFNAQAD EEKEMLSNHG GCPIYEGRKV 180
  181 IATIWIRAYN QRILPMAPAG SSIHASWLIP SLSNRFRPEM QTQSPVPN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.75
Match: 2hbtA
Description: No description for 2hbtA was found.

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