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View Structure Prediction Details

Protein: inx-5
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-5.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
440.0 [0..13] [433..13]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGVLLPYVR KFQRSAESND IADRFSYQYT STLLGFSAIM MAASQYVGRP IQCWVPAQFT  60
   61 RTWEKYAETY CFIKGTYFLP GAFASEGEMS VTSPDDAVTA TPQVGYYQWI PIVLVLQAFL 120
  121 FYLPSIIWRT F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NESCELKIKE LAAVSEASRK IKSNMSDDQV KATKFGRYFF KKLNFRNESP VFKETGSVVA  60
   61 S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKFLPALYLL VKILYLANIV LQFWILTYFL ETKSWMWGWQ TFQDLMAGRE WETTGIFPRV  60
   61 TMCDFSIMDL TSVHDHSIQC VIVINMLAEK VYVFFWFWLL FVGLLTVCSL AYWAVIYMLQ 120
  121 SVGRNFIYSY LQQTPEFQTE QERGSFVPAN FVDKCLTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [351-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGVFISRLVQ QNSGDLFTSI MLGEMFSLYR AREAEKAHKK DDDSALPASA PVDLQEDDDD  60
   61 DTPFPPPTKA VAETLTSDDE EEETDVDSPD TTATLPR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle