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View Structure Prediction Details

Protein: inx-5
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-5.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
440.0 [0..13] [433..13]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGVLLPYVR KFQRSAESND IADRFSYQYT STLLGFSAIM MAASQYVGRP IQCWVPAQFT  60
   61 RTWEKYAETY CFIKGTYFLP GAFASEGEMS VTSPDDAVTA TPQVGYYQWI PIVLVLQAFL 120
  121 FYLPSIIWRT F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NESCELKIKE LAAVSEASRK IKSNMSDDQV KATKFGRYFF KKLNFRNESP VFKETGSVVA  60
   61 S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKFLPALYLL VKILYLANIV LQFWILTYFL ETKSWMWGWQ TFQDLMAGRE WETTGIFPRV  60
   61 TMCDFSIMDL TSVHDHSIQC VIVINMLAEK VYVFFWFWLL FVGLLTVCSL AYWAVIYMLQ 120
  121 SVGRNFIYSY LQQTPEFQTE QERGSFVPAN FVDKCLTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [351-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGVFISRLVQ QNSGDLFTSI MLGEMFSLYR AREAEKAHKK DDDSALPASA PVDLQEDDDD  60
   61 DTPFPPPTKA VAETLTSDDE EEETDVDSPD TTATLPR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle