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View Structure Prediction Details

Protein: CE33737
Organism: Caenorhabditis elegans
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33737.

Description E-value Query
Range
Subject
Range
gi|119193086, gi... - gi|90305935|gb|EAS35566.1| hypothetical protein CIMG_00920 [Coccidioides immitis RS], gi|119193086|r...
173.0 [0..36] [384..10]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEQPHVAVE SYLVGNDSIM ASVASSSQVI LPVAADSSSI GSVNTMDEVH YASTDFYIGL  60
   61 GLAVSSSLFI GSSFIIKKKA LLKLASGDTS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRASEGGYGY LREWMWWMGV ITMGIGEACN FAAYAFAPAS LVTPLGALSV IVTAILSSRM  60
   61 LNERLNLLGS IGCALCLLGS TVIVIHSPKE EEVG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.03
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [185-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMADLALKMK DAGFLIYVIL IILATGFIVV YVAPRYGHSN ILVYISVCSL IGSLSVLSET  60
   61 LAGNQQFTNW LTYFWLASVA MCVSVQLIYL NKALDIFNTS MVTPIYYVFF TTFVILASSI 120
  121 LYKEWSCLGA SDVIGNFVGF LTTIIGIFQM QLFRDVNISL YQVQRLVSRP SATLANADFS 180
  181 SSSTNLVDDY CMRQSNSNRR MVYT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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