| Protein: | ced-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 492 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ced-6.
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..23] | [479..1] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MAKDIYKTFK RSVSGIVGGN NINGEGSSSP STSAPQVKYR GGTGRTWIHP PDYLINGHVE 60
61 YVARFLGCVE TPKANGSDVA REAIHAIRFQ RDLKRSEQTR ETAKLQKVEI RISIDNVIIA 120
121 DIKTKAPMYT FPLGRISFCA DDKDDKRMFS FIARAEGASG KPSCYAFTSE KLAEDITLTI 180
181 GEAFDLAYKR FLDKNRTS
|
| Detection Method: |  |
| Confidence: | 45.154902 |
| Match: | 2nmbA |
| Description: | Numb |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.80330385662185 | bayes_pls_golite062009 |
| protein binding | 1.61059302945064 | bayes_pls_golite062009 |
|
Region A: Residues: [199-492] |
1 11 21 31 41 51
| | | | | |
1 LENQKQIYIL KKKIVELETE NQVLIERLAE ALRANSKADY ENTGPPIYPG LGPPALPLSP 60
61 MPQGPPPNIP PSSIYSMPRA NDLPPTEMAP TLPQISTSSN GASPSVSPAS TSPSGPAPSI 120
121 PPPRPPALAP PPPVAPRRNP VVSPKNSTAG LLDGLELGSA EPAKKAPSNI FDDSFDPRAG 180
181 EKKSTAAEYN PFGADFLSGI QNGKEAPPSA SAELLASEAI ARLPKPESSS VPPKKTAAEY 240
241 DAMINEVEKK LAAMSSGSFE FGQLQTGDLG GIEGESDYGT PSDRLNPKMM NLKQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
