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View Structure Prediction Details

Protein: zfp-1
Organism: Caenorhabditis elegans
Length: 635 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zfp-1.

Description E-value Query
Range
Subject
Range
zfp-1 - status:Confirmed UniProt:P34447 protein_id:AAK26137.1
432.0 [0..1] [635..233]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLADPLPIKS NKVNNVLGLG SAINAVSLEE RPASGSTVNS GIFVPPPTAF SPPLTTSSRS  60
   61 SVAQDPSPPL TINKNSLSSS GPLIPSTAHL SATTASATPI MANGSTLPPS SETTVGTHCL 120
  121 QQLQIQSAAA AAITQNQIGP SELNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPAASQLSSF MHEIPARNTT SVASLLPPGA AEYHLNGSGD EEKTVKAVLT APLTKAKRIR  60
   61 DSKNDMMDKT HKRPRANARP PAVLGSMSSG SSGGTVGKSP SMQRLQNLVA PIVSETVTDF 120
  121 QR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRVADRTAAE RRAAAAQSQP STSTNGGPNV TIPAVVEVHT NSTNSTNHQN NGLTQNAPAS  60
   61 TSMQAGTSSN DGVISQNGTS STSQSNRLNL PSFMEQLLER QWDQGSSLLM ANAHFDVAQL 120
  121 LSCLFQLKSE NFRLEENLSG LRKRRDHLFA LNSRLAEVNT LDVSKRQRSD GLLLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [443-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQIAHHLDPT SIVPKAEVHK QEPLSAPTSV PLPANHSSSL FEDIKAPKAT YSRKTPSNIP  60
   61 LTVPLSTAAT ALTTTTAASS GAPVNSNIQN HRATPSTAGA PMAATPIMTA VTSANELAAL 120
  121 SPERAQALLN MYRMPLDANV AAQLSMITNF PGQVNPSLFS RLLAVNMMNG GLQPNGQPLS 180
  181 ALPPPTSATP NGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle