YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: zfp-1

General Information:
Name(s) found: zfp-1 / CE33653 [WormBase]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • WBGene00006975 locus:zfp-1 status:Partially_confirmed UniProt:G8JYB8 protein_id:CCD71237.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 635 amino acids

    Gene Ontology:
    Cellular Component: chromatin [ISSLink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    RNA interference [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]
    chromatin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLADPLPIKS NKVNNVLGLG SAINAVSLEE RPASGSTVNS GIFVPPPTAF SPPLTTSSRS  60
   61 SVAQDPSPPL TINKNSLSSS GPLIPSTAHL SATTASATPI MANGSTLPPS SETTVGTHCL 120
  121 QQLQIQSAAA AAITQNQIGP SELNGYPAAS QLSSFMHEIP ARNTTSVASL LPPGAAEYHL 180
  181 NGSGDEEKTV KAVLTAPLTK AKRIRDSKND MMDKTHKRPR ANARPPAVLG SMSSGSSGGT 240
  241 VGKSPSMQRL QNLVAPIVSE TVTDFQRDRV ADRTAAERRA AAAQSQPSTS TNGGPNVTIP 300
  301 AVVEVHTNST NSTNHQNNGL TQNAPASTSM QAGTSSNDGV ISQNGTSSTS QSNRLNLPSF 360
  361 MEQLLERQWD QGSSLLMANA HFDVAQLLSC LFQLKSENFR LEENLSGLRK RRDHLFALNS 420
  421 RLAEVNTLDV SKRQRSDGLL LQQQIAHHLD PTSIVPKAEV HKQEPLSAPT SVPLPANHSS 480
  481 SLFEDIKAPK ATYSRKTPSN IPLTVPLSTA ATALTTTTAA SSGAPVNSNI QNHRATPSTA 540
  541 GAPMAATPIM TAVTSANELA ALSPERAQAL LNMYRMPLDA NVAAQLSMIT NFPGQVNPSL 600
  601 FSRLLAVNMM NGGLQPNGQP LSALPPPTSA TPNGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..267] MSA 5.16399 View MSA. No confident structure predictions are available.
    3 View Details [268..442] deduced N/A No confident structure predictions are available.
    4 View Details [443..635] MSA 4.153996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle