| Protein: | unc-78 |
| Organism: | Caenorhabditis elegans |
| Length: | 517 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-78.
| Description | E-value | Query Range |
Subject Range |
|
|
597.0 | [0..1] | [516..1198] |
|
Region A: Residues: [1-517] |
1 11 21 31 41 51
| | | | | |
1 MSEFSQTALF PSLPRTARGT AVVLGNTPAG DKIQYCNGTS VYTVPVGSLT DTEIYTEHSH 60
61 QTTVAKTSPS GYYCASGDVH GNVRIWDTTQ TTHILKTTIP VFSGPVKDIS WDSESKRIAA 120
121 VGEGRERFGH VFLFDTGTSN GNLTGQARAM NSVDFKPSRP FRIISGSDDN TVAIFEGPPF 180
181 KFKSTFGEHT KFVHSVRYNP DGSLFASTGG DGTIVLYNGV DGTKTGVFED DSLKNVAHSG 240
241 SVFGLTWSPD GTKIASASAD KTIKIWNVAT LKVEKTIPVG TRIEDQQLGI IWTKQALVSI 300
301 SANGFINFVN PELGSIDQVR YGHNKAITAL SSSADGKTLF SADAEGHINS WDISTGISNR 360
361 VFPDVHATMI TGIKTTSKGD LFTVSWDDHL KVVPAGGSGV DSSKAVANKL SSQPLGLAVS 420
421 ADGDIAVAAC YKHIAIYSHG KLTEVPISYN SSCVALSNDK QFVAVGGQDS KVHVYKLSGA 480
481 SVSEVKTIVH PAEITSVAFS NNGAFLVATD QSRKVSF
|
| Detection Method: |  |
| Confidence: | 87.69897 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| binding | 2.2778252170547 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| protein binding | 1.42618832381942 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 1.24520283111044 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| tubulin binding | 0.968047176592527 | bayes_pls_golite062009 |
| microtubule binding | 0.834073483714259 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| dynein binding | 0.41765917405931 | bayes_pls_golite062009 |
| receptor binding | 0.364508343879101 | bayes_pls_golite062009 |
| 0.13154833491231 | bayes_pls_golite062009 | |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| transcription factor binding | 0.0250316290871848 | bayes_pls_golite062009 |
| myosin II binding | 0.0145748031956598 | bayes_pls_golite062009 |
