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View Structure Prediction Details

Protein: nac-2
Organism: Caenorhabditis elegans
Length: 551 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nac-2.

Description E-value Query
Range
Subject
Range
gi|50758492 - gi|50758492|ref|XP_425404.1| PREDICTED: similar to NaDC-2 [Gallus gallus]
339.0 [0..9] [542..38]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSPQRTLI KKLLVLLGPL VAVPLLFFGP EYRCLFSIIF LSTYWIGEAF PIGVTSLFPL  60
   61 ALYPILQIVP SKQISPVYFK DSIVLFMCTL IMAMAVEATG LHRRIALKLL TKVGAKQPVM 120
  121 LLGFMCITSF ISFFVSDTAC TALMCPTAVA LLMSMSDAVQ HL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEDHRKPKPP PDDATVAEKL RIDDMTPQDA GFCKALILAC AHASLIGGTA IITSTGPNLV  60
   61 FRENIHKRYP EGQVTMTYLQ WMVFAIPPMF VYLLASYIIL VCYFMGPSTF ARWFERPSKE 120
  121 EAHLKKLIEK NIQTMYEDLG DVSWGEKSVF VFFILLIGSW ISRDPGFTPG WGDLLPH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [340-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNFISDSVSG VLISCILFVW PKDPFDPIDP MAPILKWTDM KSKFSWSCTL LIGAGYAISE  60
   61 GVDKSGLSRL ISCGMKNIFV GMSSLPLQLT VTTIIVIMTE FASNVSTGSI FIPISLGVAE 120
  121 SMGVHPLYLA LPTTVACSFA FMLPISTPPN AVVYDTKVIS MVEMIVCGFL LNIACILITS 180
  181 LNMNTWTYFI FSLNIFPENI VISSENSSYP VC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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