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View Structure Prediction Details

Protein: CE33455
Organism: Caenorhabditis elegans
Length: 516 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33455.

Description E-value Query
Range
Subject
Range
CE33453 - A. faecalis PHB depolymerase status:Confirmed UniProt:Q86ND6 protein_id:AAO38593.1
829.0 [0..1] [507..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPASTQQNA INAFVENVLL NSNFYGLALD ILTHDNRTLV TAIPYPTTDK YNVQGYGSAR  60
   61 SVDEFRNQVI AFNGMIQPIS QSSSISDALL YVTTSLPAGG VKSSLIIVGN SAAMIDNIAP 120
  121 ILTNQLRSDF DIYTVGVGSG AVDLSPLSSG TGFSFTGDTQ QVADQIGLKM ASSSPSVYCP 180
  181 PPVTTVRPTV GPCQCTGRWV YNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLAIAFENIK TNGSQSVANF LSNTLLKNPD SYGLTNDVNG NQPSQLTLIP YPDSNTYPTY  60
   61 PYGWIRSVND IGNYIDAISP LPLATPDPRI SDALTFISAQ PTTLNSKVVL LVGSNGTNVN 120
  121 AAMDSANQLK NAGYLVITVA QTTAASVFQP LASGSQFALH IGDGNDDAVA AQIASMLLDY 180
  181 SFTCFDDGSS TPSPTTRCPG TQGTTQPGFS TTTSLSPSTS SSSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [428-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNGKIATVFE LNAVQPEIQN IIHFVRNNLY NSTNYDFATV SEAINIPYAF TDNYNSNILQ  60
   61 YGIAKQEVQA ISQNYLLDLQ ELDRSSEQC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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