YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE33455
Organism: Caenorhabditis elegans
Length: 516 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33455.

Description E-value Query
Range
Subject
Range
CE33453 - A. faecalis PHB depolymerase status:Confirmed UniProt:Q86ND6 protein_id:AAO38593.1
829.0 [0..1] [507..1]

Back

Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPASTQQNA INAFVENVLL NSNFYGLALD ILTHDNRTLV TAIPYPTTDK YNVQGYGSAR  60
   61 SVDEFRNQVI AFNGMIQPIS QSSSISDALL YVTTSLPAGG VKSSLIIVGN SAAMIDNIAP 120
  121 ILTNQLRSDF DIYTVGVGSG AVDLSPLSSG TGFSFTGDTQ QVADQIGLKM ASSSPSVYCP 180
  181 PPVTTVRPTV GPCQCTGRWV YNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLAIAFENIK TNGSQSVANF LSNTLLKNPD SYGLTNDVNG NQPSQLTLIP YPDSNTYPTY  60
   61 PYGWIRSVND IGNYIDAISP LPLATPDPRI SDALTFISAQ PTTLNSKVVL LVGSNGTNVN 120
  121 AAMDSANQLK NAGYLVITVA QTTAASVFQP LASGSQFALH IGDGNDDAVA AQIASMLLDY 180
  181 SFTCFDDGSS TPSPTTRCPG TQGTTQPGFS TTTSLSPSTS SSSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [428-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNGKIATVFE LNAVQPEIQN IIHFVRNNLY NSTNYDFATV SEAINIPYAF TDNYNSNILQ  60
   61 YGIAKQEVQA ISQNYLLDLQ ELDRSSEQC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle