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View Structure Prediction Details

Protein: CE32965
Organism: Caenorhabditis elegans
Length: 261 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32965.

Description E-value Query
Range
Subject
Range
gi|7023671 - gi|7023671|dbj|BAA92047.1| unnamed protein product [Homo sapiens]
282.0 [0..4] [252..13]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPKKNDLD GNPVNLFSEK EIKDYYNDFI FDFNTCTELP QFLAGNPDYE FSKQTNRLTQ  60
   61 AAMEIRKIKD KDLYDQHTDM M

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDFARNPRIL QNYFICKNKA FLKLCEIFEV FKFDIFEGSS ISSFHLCEGP GYFIEAVHVA  60
   61 LMRSRGKNEE MSYWKWGANT LNPYFENRSC FDKLIDDSHI RPTMDQWYFG PSDDGDIEKF 120
  121 TEEYLIKQKL AGTFDLVTAD GSTNTQGKEG EIESIKKWSS DSENLSILCQ KYKRCYESSC 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2nyuA
Description: No description for 2nyuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle