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View Structure Prediction Details

Protein: CE32965
Organism: Caenorhabditis elegans
Length: 261 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32965.

Description E-value Query
Range
Subject
Range
gi|7023671 - gi|7023671|dbj|BAA92047.1| unnamed protein product [Homo sapiens]
282.0 [0..4] [252..13]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPKKNDLD GNPVNLFSEK EIKDYYNDFI FDFNTCTELP QFLAGNPDYE FSKQTNRLTQ  60
   61 AAMEIRKIKD KDLYDQHTDM M

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDFARNPRIL QNYFICKNKA FLKLCEIFEV FKFDIFEGSS ISSFHLCEGP GYFIEAVHVA  60
   61 LMRSRGKNEE MSYWKWGANT LNPYFENRSC FDKLIDDSHI RPTMDQWYFG PSDDGDIEKF 120
  121 TEEYLIKQKL AGTFDLVTAD GSTNTQGKEG EIESIKKWSS DSENLSILCQ KYKRCYESSC 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2nyuA
Description: No description for 2nyuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle