| Protein: | shk-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 524 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
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Region A: Residues: [1-90] |
1 11 21 31 41 51
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1 MRFGGQRRCI ESSDDNDSID SMSIQQKNKE KEEWKWAQSL ARRLEQVLNV HPEKYQNGCS 60
61 SQRPSRQPSP VEQLAPIRSH SADFGRAAEM
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| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [91-524] |
1 11 21 31 41 51
| | | | | |
1 ASGNSEEGKG MLLRNGDDRI RLPSPQRGTP DTSSTQGHPY TDQIVTINVS GMRFQTFEST 60
61 LSRYPNSLLG DRNKRQHFFV SDTNEFFFDR HRTTFESILY IYQSGGRVKR PEIVPIDIFL 120
121 KEMRFFQMGD DLLEEFWIAE GYEKPKEVMM PNNKTQRKIW ELMEYPDSSL SARIIAFISI 180
181 AVIALSIISF CWETVPSDIE EKPINNSATA ELLDEMDEKH YSPFFWIELM CILWFTIELI 240
241 LRFISCPCKV TFATSVLNII DFVAIAPFFV NFFFADTSKS NSSMSFAVLR VLRLVRVFRV 300
301 FKLSRHSVGL QILGKTFRSS VQEFCLLIFF MAIALVLFAS GMYFAEQGEP NSKFTSIPAS 360
361 FWFVLVTMTT VGYGDLVPLS PFGKVVGGMC AMIGVLTLAL PVPIIVANFK HFYRQENRLA 420
421 SMKSKGDDAD DDIA
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| Detection Method: | |
| Confidence: | 82.30103 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
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