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View Structure Prediction Details

Protein: CE32696
Organism: Caenorhabditis elegans
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32696.

Description E-value Query
Range
Subject
Range
gi|39587413, gi|... - gi|39587413|emb|CAE75067.1| Hypothetical protein CBG22982 [Caenorhabditis briggsae], gi|187021385|em...
gi|157777188 - gi|157777188|ref|XP_001666660.1| hypothetical protein CBG22982 [Caenorhabditis briggsae AF16]
401.0 [0..17] [509..17]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLLAVLLA ACVLTQVLSA PSNEQRVRRN MIRGRPRGGM KKTPPMSSVS HMINFDNVVS  60
   61 STFTQTLDH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 1yr2A
Description: Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Inter-Domain Dynamics in Catalysis and Specificity
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [70-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDSSVGKTFQ QRYYHNNQWY KAGGPAFLML GGEGPESSYW VSYPGLEITN LAAKQGAWVF  60
   61 DIEHRFYGET HPTSDMSVPN LKYLSSAQAI EDAAAFIKAM TAKFPQLANA KWVTFGGSYS 120
  121 GALAAWTRAK HPELVYAAVG SSGPVQAEVD FKEYLEVVQN SITRNSTECA ASVTQGFNLV 180
  181 ASLLQTSDGR KQLKTAFHLC QDIQMDDKSL KYFWETVYSP YMEVVQYSGD AAGSFATQLT 240
  241 ISHAICRYHI NTKSTPLQKL KQVNDYFNQV SGYFGCNDID YNGFISFMKD ETFGEAQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.30103
Match: 1azwA
Description: Proline iminopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.13500795029724 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.560001331598537 bayes_pls_golite062009
peptidase activity 0.49210021845334 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.204622919291197 bayes_pls_golite062009
structural molecule activity 0.151914509834157 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [368-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRAWVWQTCT EFGYYQSTSS ATAGPWFGGV SNLPAQYYID ECTAIYGAAY NSQEVQTSVD  60
   61 YTNQYYGGRD NLNTDRILLP NGDIDPWHAL GKLTSSNSNI VPVVINGTAH CADMYGASSL 120
  121 DSMYLTNARQ RISDVLDGWL HAN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 1zi9A
Description: Crystal Structure Analysis of the dienelactone hydrolase (E36D, C123S) mutant- 1.5 A
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle