| Protein: | mab-21 |
| Organism: | Caenorhabditis elegans |
| Length: | 364 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mab-21.
| Description | E-value | Query Range |
Subject Range |
|
|
446.0 | [0..1] | [364..1] |
|
Region A: Residues: [1-364] |
1 11 21 31 41 51
| | | | | |
1 MLGHNQNVVY QVNNYFNEKV QHRKVRVTKT VQRIAKVVQE ILKEVEAQEP RFINTLSETT 60
61 TGRFDGIVVH SPSEYEAVLY LNQMGVFNFV DDGTIQGCAV LKLSDGRKRS MSLWVEFITA 120
121 SGYLSARKIR HRFQNIVAQV LQTPQFSDYC KLLQDNTDVR VRVDDKYTVQ ITCAFRCNGI 180
181 WPRSASHWPI AGLPWPNAAL ANQTKAEGFD LTSRETAITQ QNNPNKQASS MEADAWAMKM 240
241 HGAENMLLTG GRRKTLSILK CLRDAHMDFP GTPVTNYILK TLVLYECEKH CSEYEWEDPN 300
301 IGDRLVGILL QLVSCLQCRR CAHYFLPSLD LLRSKPVHSI EHSAQLAWHL VRKLMIDPNA 360
361 LQSL
|
| Detection Method: |  |
| Confidence: | 1.67 |
| Match: | 1px5A |
| Description: | Crystal structure of the 2'-specific and double-stranded RNA-activated interferon-induced antiviral protein 2'-5'-oligoadenylate synthetase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.53356592031109 | bayes_pls_golite062009 |
| protein binding | 1.20472171285911 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.893478989935841 | bayes_pls_golite062009 |
| nucleic acid binding | 0.766163328557144 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.378944807711308 | bayes_pls_golite062009 |
| DNA binding | 0.294396132196589 | bayes_pls_golite062009 |
| transcription factor binding | 0.0365937361646029 | bayes_pls_golite062009 |
| transferase activity | 0.02609645275331 | bayes_pls_golite062009 |
