| Protein: | hgrs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 729 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hgrs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..2] | [702..5] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MATKFQRVLD QATDSTLVEP NWEGIILCTD MIRSGEVPAK PSLQAIRKRM QHENPHVVNH 60
61 TLLVLDACVK NCGHKVHAEV ATREFMEDFK NLVTENKYDE VKNKSLEMLQ CWATAFANKP 120
121 EYKMVVDTHN LMKLAGFDFP SLKEADAMFM AQVAPEWADG PECYRCRSVF SVFTRKHHCR 180
181 ACGQIFCDKC SSRELALPQF GIEKEVRV
|
| Detection Method: |  |
| Confidence: | 81.30103 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.24093737575291 | bayes_pls_golite062009 |
|
Region A: Residues: [209-275] |
1 11 21 31 41 51
| | | | | |
1 CETCYEKKVA EVKERYPAVK KQLDAAHGRK GDSEADKAAK EKLLREKEEE DLALAIAISQ 60
61 SEAEAKE
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1y02A |
| Description: | Crystal Structure of a FYVE-type domain from caspase regulator CARP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166244039424217 | bayes_pls_golite062009 |
|
Region A: Residues: [276-563] |
1 11 21 31 41 51
| | | | | |
1 KEKQNNLYSM YNGIKPEVDG YKGAAEPVTA PPPDDSSSDP LARYLNRDYW QQKKEGKVED 60
61 WSSRSSALSA TAPPPSEPSI APSICSTLMG PDDNSLNADI AAMSLGGTNG LNGTVSDDAK 120
121 LQADDTMKWC QSIREQVSVM DNRIRSNLAR GRPVFNDSAI QDLFTKLTEL HSHVLSRMHT 180
181 LDEQRGYYES LQDHLANIGE ARQAIDEMRE EHERKRQERM AEEQRLRQAQ MQQTLEMMRM 240
241 KKHAMLMEQR EQALQRFQQQ QQEMAMRRHQ QQAYYNPQQM GYGAPPPS
|
| Detection Method: | |
| Confidence: | 1.01 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [564-729] |
1 11 21 31 41 51
| | | | | |
1 GPQQPPQQSY YGYQQGPQSQ APPPSSQYQQ SHASTQQQQQ QYYQHYQANQ TVTQPVQQAQ 60
61 QQYQQQYQGY YQQQQPYQQQ AGYQNPQQHQ NYQNGTTNEN GQYQQQQSSE VKQEHQNHGY 120
121 QQQQAQHPPA SVASNGHNGY GNVDQNAHHH QQQQPQIAEQ PLISFD
|
| Detection Method: | |
| Confidence: | 7.221849 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
