| Protein: | sop-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sop-2.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..2] | [733..807] |
|
Region A: Residues: [1-254] |
1 11 21 31 41 51
| | | | | |
1 MSSNLTSNEM SSTSAIVEPP EAVKGNERDK STRRSTSQVV RPEKHEVENA LEDQCSSSSL 60
61 PKEAQYYAKL DKKLEGKDPR SQFYEAVRLS ADIFAHKFEK AVCSRQTFEP TNSIIKVLNT 120
121 AEEEMLHEKV VPLPVSSKLQ YYLNRGRYDT IFDRDEQLQR TADPMADEPD HVEKRVTSIL 180
181 EQASREMEEG EVEPVFYDGS DEDQELPIDL GAMRNLQRTN KFAARSSRMA ARRGGRPGYR 240
241 GAFRGAARGA PSRR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [255-462] |
1 11 21 31 41 51
| | | | | |
1 PAPAAEVAPE TPVAAPMAPA APAAPATPEA APAAEVMDTS IATEMPQESA VDLSNVSAAT 60
61 EMDTSKEGEA SRPTSEKKKK IRTTEMDRLM SMDLGPKDGG RVGELGHMWP ESRRRPAAPL 120
121 PETPAAQPRK SLPRRAAEKK KPEDSDAAEE QEVEMEVDND ASTSTPRNAR GGRGGGNRRG 180
181 SRRGQKRTSG GSGKLVEPKK EPVDEPAE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [463-642] |
1 11 21 31 41 51
| | | | | |
1 KIPKRSEAAP EVPATATTKE APPSTSSSPP DAPATPATPA SSDSRDSPRK IRAMIFSLTG 60
61 SPPESETPPV LQQEQVISTA APTAGRHPNI IQQVPHINRI PPQPLRRLTA PQAPPASQPE 120
121 EPPVQQTVPV VKVELASAPA PIVRDPQSTE PVPPAMPTLV ENNHEATLIL PPNKTSDYTR 180
181
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [643-735] |
1 11 21 31 41 51
| | | | | |
1 WNAQDLINWV RLLITNNVDS TIAIMVREEF DGETLACLVL DDDFRKEVPI PYGHYKKMKI 60
61 YGTEVLNHYR TEKYQADLRK FHEELAAWKA QQR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.887 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.687 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.466 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.450 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.428 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
