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View Structure Prediction Details

Protein: CE31845
Organism: Caenorhabditis elegans
Length: 630 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31845.

Description E-value Query
Range
Subject
Range
emp-PB - The gene epithelial membrane protein is referred to in FlyBase by the symbol Dmel\emp (CG2727, FBgn0...
541.0 [0..9] [549..31]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSNNSSNG ASSSSPIASK YSSGRMRRMS CCQLVISAVL IGLGSFLLFG SLITHTVVVP  60
   61 KVVKSSIEEN SRLVNGSIMW EKWAMPEYKI RFNMYVYSTK NPDEFMNGAI PEVTGSGPYV 120
  121 FDKKMENRVV SAENGTVKYR RFFTYNFNEQ ESCQTCIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNRIWVPNMI YQKFVEAAST EGMKAAATTL LSQTAFLEVE VEELLFEGYK DPFLDKVCEI  60
   61 PFMNFVCEAI LDVPERIGLF FKANGTGSKV YEIDDGTRNP DDLGKILSYD ESPILDETWW 120
  121 STDESLKIKG TD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [291-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLFHPFLSK HEKLYVYVAE LCRSIWLEFK EEVEYRGLKA YRFVVPPEVF DVTHPGNQGF  60
   61 CNPSEKQFYE SQNDSSNCMP KGLLEISKCQ QSQPPITISL PNF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [394-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFAPSEVRGS VKGLNETDEI RDSIVVDIEP RVGAVLYARR VSQVNIEMWK GKNLTFPVNL  60
   61 KKMKSALIPV LILHETSEID DDSLEQIRSQ LYETESIAYT SCDVMMIIGA IMLLLGFLFL 120
  121 SFSLGLCDPI LGRRSKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [531-630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANGLSPEPLP PYVPKGEPNG YHHNHAYITG LFGKNFSNFE KNPIFKPSSV FFSNFQLFPL  60
   61 KIIFSVSVNF VNIALLVFLP IFITHTISPE SPFFPTSSSL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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