| Protein: | nhx-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 655 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhx-8.
| Description | E-value | Query Range |
Subject Range |
|
|
362.0 | [0..35] | [653..17] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MRFALKTALS ICIFLLIFQT VDSDSSDSSA SASVVSGAVK SEDTVVAVNK TDVLGEAIDA 60
61 NATSLEQHGA AIVGNVSEEK KRSLAIFFIL FVIMLATLVV HMLIVSKIHW MPESLAIVAL 120
121 GALIGSILSY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [131-497] |
1 11 21 31 41 51
| | | | | |
1 SRRDWSEIEA LSPDVFFLVL LPPIIFENAY NLNKGYFFSN FVPILTFAIF GTTISAMVIG 60
61 AGLYILGAIG LIFEFTFFEC FAFAAMISAV DPVGTLAIFQ AVKVESLLYM LVFGESMLND 120
121 AVSIVLAATA LRHAKPSFNS LPASEIITSA FVTFTEMFFF SACLGVGIGL LSALLFKHVD 180
181 LRKTPSLEFA LLLIFSYIPY GFAEALDLSG IMAILFCGIS MSQFTRHNVS PIAQITFRHT 240
241 FRTISFVAET STFAYIGMAF FTIKLNFAPW LIFWSVVLCL LGRACNVFPL AYLVNQCRKD 300
301 VQISMKNQII MWFSGMRGAV CFALVLYMDL DKEKKSILLT TVLFLILFTT IFLGGSALPF 360
361 ISFINRC
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1zcdA |
| Description: | Crystal structure of the Na+/H+ antiporter NhaA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [498-655] |
1 11 21 31 41 51
| | | | | |
1 YPNERQRKRR RTPRNKESTG NSSALMMSKT QEMSFFGSDD WGPKKSALDA TSSAGRIMRQ 60
61 LFVRKFTAIE RLENRDKLAA LTKRALASDQ MTDSDDVEFG GGGGVGGGGR MKDDVTPTRG 120
121 RSGSRNSSDV IISAGGGGVS GEHHLLISSG SDSSTNEF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
