| Protein: | apt-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 588 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MEEEPVRPID YWVCRATDRF IGDEERIKAL DFIIESIYKQ PASALLAVDL FSHKLSSPSQ 60
61 EEAMLTIRAL DYLVRNGGEK VHERCGRYKF LNELVRLIAP KYNGKLTSDA LKTEIIKLLF 120
121 IWQLSIKHIP KYKQVYESLK LSKIITD
|
| Detection Method: |  |
| Confidence: | 51.30103 |
| Match: | 1jplA |
| Description: | ADP-ribosylation factor binding protein Gga3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.44619623515316 | bayes_pls_golite062009 |
| binding | 1.13238817008904 | bayes_pls_golite062009 |
|
Region A: Residues: [148-324] |
1 11 21 31 41 51
| | | | | |
1 DPHVRETEVP VFAVPPVRSS VFDNEEQAVL LKALLSSNRP EDLETANNLI KTLVETEEHK 60
61 LVKIHERRKK LDHAINLCNQ VEHLRLDKAA ETIGLGNYSP DNELTLQRVT NELIQLQELF 120
121 YGYVNELAEN NDPCLEEVLN INDQINRVLP ENETPKCGNR APISARTQLD PENQELL
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 1oxzA |
| Description: | ADP-ribosylation factor binding protein Gga1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.23852637357121 | bayes_pls_golite062009 |
| clathrin binding | 1.10771940280602 | bayes_pls_golite062009 |
| binding | 1.00165323191449 | bayes_pls_golite062009 |
|
Region A: Residues: [325-397] |
1 11 21 31 41 51
| | | | | |
1 VFNTPTSEVP PKNGFCDPRD LEGSLLNNMI ESEFVEEPKI VPVQQMTPVL NRNSSASPRA 60
61 SGDSSIFETD FLA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [398-588] |
1 11 21 31 41 51
| | | | | |
1 GKRLPEPLKP PTLNELKPNT TTITLEALEV LVPPMSPEPT SLSPKAIPEK VALNPSSIIM 60
61 RNRVPIEVLY SKGMRILLYY CQSDMTVSNI HSYVLVIQNH NNFTIKDVNL SLKTNDKNVI 120
121 IRLQDSVNNL AGFNIFGQQE TINLLLCIQQ LNDVKDVELD FTLAYKKSLE SAISGSFTLP 180
181 IIPEHIFNIN F
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1p4uA |
| Description: | ADP-ribosylation factor binding protein Gga3 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 0.859533416004855 | bayes_pls_golite062009 |
| binding | 0.575039289605127 | bayes_pls_golite062009 |
