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View Structure Prediction Details

Protein: alh-4
Organism: Caenorhabditis elegans
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alh-4.

Description E-value Query
Range
Subject
Range
gi|52785994, gi|... - gi|52785994|ref|YP_091823.1| DhaS [Bacillus licheniformis ATCC 14580], gi|52348496|gb|AAU41130.1| Dh...
521.0 [0..2] [430..61]

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Predicted Domain #1
Region A:
Residues: [1-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTELVETQ RKYFRTGETK PVKFRKQQLL KLKKFIEENR EALSEAVWKD LRRRHESTEI  60
   61 LEIGMTIQEI DYFLKNIDDW VKPTHVEKTF TTALDKPVIE KDPKGVVLII SPWNYPVSMI 120
  121 LLPMVPAIAA GNTVVIKPSE LSENVAATFE KLIPKYFESK YVTVVNGGIP ETTDLLKERF 180
  181 DHILYTGCPP VAKIIMTAAA KHLTPVTLEL GGKCPVVVED DADIDISAKR IAWGKWLNCG 240
  241 QTCLAPDYIL VNSTVKPKLV AAIRKYVNEF YGEDVKASKD YARMINQRHF DRISGLLDKT 300
  301 QGAVLIGGER DRADLYIPPT VLDVEKSDPF MHDEIFGPVL PIITVQSFSE SLEYIADGEK 360
  361 PLAAYIFTRN EAKVKRLLNE TSSGGVTVND VLMHITVDTL PFGGVGVSGM GRYRGKYGFD 420
  421 TFTHEKSVLH RGFFGESLLA ARYPPLSQQK LDQMRRLTGK RISLNLMNVA TLPIVMASFV 480
  481 FGMLFQFIFR FSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 1ad3A
Description: Aldehyde reductase (dehydrogenase), ALDH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 4.47226217021998 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 4.34495776828926 bayes_pls_golite062009
malonate-semialdehyde dehydrogenase (acetylating) activity 4.2273960318884 bayes_pls_golite062009
methylmalonate-semialdehyde dehydrogenase (acylating) activity 3.87605237828483 bayes_pls_golite062009
succinate-semialdehyde dehydrogenase [NAD(P)+] activity 3.64672165191647 bayes_pls_golite062009
3-chloroallyl aldehyde dehydrogenase activity 3.37049090049734 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 3.2867555127991 bayes_pls_golite062009
aldehyde dehydrogenase (NAD) activity 2.81851373615334 bayes_pls_golite062009
catalytic activity 2.80804701752928 bayes_pls_golite062009
succinate-semialdehyde dehydrogenase activity 2.71501590413507 bayes_pls_golite062009
1-pyrroline-5-carboxylate dehydrogenase activity 2.6673036327943 bayes_pls_golite062009
aldehyde dehydrogenase [NAD(P)+] activity 2.43250909158896 bayes_pls_golite062009
acyl-CoA binding 2.26220696569489 bayes_pls_golite062009
benzaldehyde dehydrogenase activity 2.02102050611755 bayes_pls_golite062009
retinal dehydrogenase activity 1.42867174920845 bayes_pls_golite062009
binding 1.06673666884196 bayes_pls_golite062009
retinoid binding 0.983782635681687 bayes_pls_golite062009
isoprenoid binding 0.900374761028287 bayes_pls_golite062009
protein binding 0.894945263794726 bayes_pls_golite062009
glutamate-5-semialdehyde dehydrogenase activity 0.882678635212924 bayes_pls_golite062009
electron carrier activity 0.869224905025397 bayes_pls_golite062009
hydrolase activity 0.352374326884796 bayes_pls_golite062009
benzaldehyde dehydrogenase (NAD+) activity 0.23487570676521 bayes_pls_golite062009
histidinol dehydrogenase activity 0.177840865580085 bayes_pls_golite062009

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