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View Structure Prediction Details

Protein: fmo-1
Organism: Caenorhabditis elegans
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fmo-1.

Description E-value Query
Range
Subject
Range
gi|68394121, gi|... - gi|68394121|ref|XP_685001.1| PREDICTED: similar to flavin containing monooxygenase 5 isoform 1 [Dani...
403.0 [0..1] [530..1]

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Predicted Domain #1
Region A:
Residues: [1-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPNNKKLLI VGAGASGLPS LRHALLYGID VTCFERTKDV GGLWHYKPQE TELSSVMKTT  60
   61 VINTSKEMTA YSDFPPESRM ANFMHNTEMY RYLLNYSKHY ELEKHIKFNH KVNSIDRNED 120
  121 YEKTGKWKVN YTDDKGATHD AVFDGVMLCS GHHTTPNWPQ KFRGQDDFKG RIIHSHSYKD 180
  181 HRGYEDKVVV VVGIGNSGGD VAVELSRIAK QVYLVTRRGT WVFNRIYDYG QPIDIAMNRK 240
  241 CISDLRSFVP AWLTNTVVEA KLNQRFDHQA YGLKPSHRVF GAHPTVNDEL PNRIACGTVR 300
  301 IKPNISKFTE TGVLFEDGSL IEQVDEIVMS TGFSFEFNLV ENGQLIRTHD NQVSLYQYMF 360
  361 PIELGDHNSL AVIGLVQPFG SIMPLSEMQA RVYLEEFTGN HVLPKKNEMT QNVHDKLETM 420
  421 ARRYVTSRRH TIQVDYVDYI EELAKMIGAD LDMKKLWKED PWLAYKVYFG PCVPYIYRLK 480
  481 GPHKWNNARD AIMSVDERVL MATNDHAQVA PDYTLLYIVG LIFAIIAVFY ILF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.522879
Match: 1w4xA
Description: Phenylacetone Monooxygenase, a Baeyer-Villiger Monooxygenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
monooxygenase activity 1.94689913362748 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.81942689155297 bayes_pls_golite062009
catalytic activity 1.56773888754354 bayes_pls_golite062009
antioxidant activity 0.79371545374882 bayes_pls_golite062009
binding 0.782880336350293 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.535467182162707 bayes_pls_golite062009
protein binding 0.116927178396589 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle