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View Structure Prediction Details

Protein: CE31963
Organism: Caenorhabditis elegans
Length: 758 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31963.

Description E-value Query
Range
Subject
Range
CE37075 - WBGene00007094 status:Partially_confirmed TR:Q9XXU6 protein_id:CAH19090.1
521.0 [0..37] [700..16]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVRSSSRT PKPVKRFVFD EDEDLEEIDL DEVDNADFER EDDEEEVLSE PSESPYTSTP  60
   61 KSSKRVNKTR GTKDFFKKDE SLQLFRFVLN ECRSQKPGRV GRVAKKRVGV NSMKYWERYK 120
  121 REIQGYRLPK QYRYHYSFYS KCFYKVLGLT PEEKVDLYYA CEMPVVTDAE KQWLVEQFHV 180
  181 EFDEFGVIIG SDVCTHWDEE HSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEDDSGKKEE KAREVSRYTE YHDDMMWKFI VDKISEGAQP IIDKHPIWDE FVKLNEENDV  60
   61 ISKKSGRNHY DRFRRILVPN LHFMPYDDFT KAVLYERLEY PIPEEYRKIL FTTTGADINE 120
  121 SGFIEYLPPS TIHQISPIVP IPCHKSNPKF SQLKEPKDLI LWSERKK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [371-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTPREDSQIW EFVRRKCVDS AGIFVKNDVL RGRGTLFFKD FRNTERKYES ITQRFVVLRK  60
   61 LIMDTDYSLK QKLEIYYAIS QPVDEDALDA FKSIACLVLN PDGTIRFAIS KSFLIGRISD 120
  121 EPAKLEAENY SYVYDLFIFN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [511-676]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETFGTAENPE PLCSVSQNRA EKFMLVSQLV FRFISRFEAL EDRRIAWITP NAQVAPKEPV  60
   61 PAPSKKKSAF EAYQSSPQTF DTIQRFSTKR PFFCGDNFQI PPKKPFLAEE DVKLEPMEYE 120
  121 NSEQIVENAE IKLEPAEELL DAETVTVEEF LMNSYSTAAP STSTAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [677-758]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APPKAPVTAP PAPQKSAQLL GKIDFAIGKM RENFDRFLQF AQQNSADLTV VQRYRYDAQM  60
   61 QQMTEKFTKD VSKVLSGDSI KR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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