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View Structure Prediction Details

Protein: CE30792
Organism: Caenorhabditis elegans
Length: 683 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30792.

Description E-value Query
Range
Subject
Range
CE30791 - status:Confirmed UniProt:Q8MNS5 protein_id:AAM29694.1
612.0 [0..1] [683..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLVAFNRQ WNIGSDDFVF PEITEALVRL SWVAFGVSVF VFHFPLACST HNLTLQLLGL  60
   61 LVINVITILL AILTAVISAR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTIMNSQPRK LIPRLLYIRL PIFIAEIALT ILATIHAFKS TNGGEGCDFA TIARVTIILE  60
   61 WFLIFTAFAG LVIVFH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [157-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTENELEDSA SIAQKSWSRR MRIFKIGQDH SMRVALDDLA ILISSFFVDS DLVPSDVVAG  60
   61 LLLAYHSPNN QYPPVKDKEH ESVPKWMNLK DAEYFLHHAT CVYGWPTYIL YNCGLKSIYR 120
  121 LFRKLQCCG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [286-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMRCAQSPCV VQQQRRERIE LTELSNGKLV KKGKSMVVED NCCYCNTAAV VLANEARNID  60
   61 LQFMSFRNRV YEVPFAVIAD HDKKSIVITI RGSCSLIDLV TDLSLEDELM TVDVDQDATL 120
  121 REDEEIDKRG DVRVHRGMLR SARYVFDTLN KNKILNDLFI SNPSYQLVVC GHSLGAGVGS 180
  181 LLTMLLKQEY PSVICYAFAP PGCVISEFGQ DEMEKYVMSV VSGDDIVSRM SFQSLHRLRE 240
  241 RVFQELLACQ RAKYEILIRG VYQLFFKYPW GDELSGVPRI S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1dt3A
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

Predicted Domain #5
Region A:
Residues: [567-683]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASPDSPTTPD IESALLTRRN SYGASDPTSE ASPTPPQRNP NHNKRLQLYV PGRVIYLSAD  60
   61 QDTGATVETW IDPKCLSDVK LSVSVLSDHL PAAVQKFLNS AAITFEQREE IVSSQPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle