| Protein: | CE31493 |
| Organism: | Caenorhabditis elegans |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31493.
| Description | E-value | Query Range |
Subject Range |
|
|
270.0 | [0..25] | [423..2] |
|
Region A: Residues: [1-246] |
1 11 21 31 41 51
| | | | | |
1 MAEERGRPQY RPNCNGLSSY YRERFGSHSP EVYLNLRISG FDDRLEREQI KQYLTQELKK 60
61 YAPFEIKVVK NPEEDERLAY VNFERNDCAR KVRYTLMDRL KSVLGKRVQC DPAGILRDQE 120
121 GKYIPDRFNR AQHGADSKRE GGSGSGNRGR PTKEPSTWRL KQDDDEATRT LFVGNMPSDV 180
181 KEREIRHVFE EHGKVEEVDI KTPINTDAAY AFVMFQTVDQ AIQAKAEEQD RPIRAGGSRM 240
241 KIGYGK
|
| Detection Method: |  |
| Confidence: | 33.39794 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [247-344] |
1 11 21 31 41 51
| | | | | |
1 SQVSRRLFVG GLGSWCDKEI LQKAFGEFGF VENIDYDHGQ PYAYVVYENT HTSQEACRSL 60
61 RGACISKGNH PIMVDYAKDL TAQPEKQQFM RKRRASKS
|
| Detection Method: | |
| Confidence: | 36.0 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [345-423] |
1 11 21 31 41 51
| | | | | |
1 PVGASAVRTP PGSPKDVVRN FAELEEAYAA TWSGKMALKK TDYPVKFYRV YGAERLPVKL 60
61 LRDEDDVPLR LLITQSVSD
|
| Detection Method: | |
| Confidence: | 1.96 |
| Match: | 1ow1A |
| Description: | Crystal structure of the SPOC domain of the human transcriptional corepressor, SHARP. |
Matching Structure (courtesy of the PDB): |
|
