| Protein: | nhx-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 749 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhx-4.
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..33] | [740..29] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MRSQKTLLVI LTLLLSYNVF CTGDTNGTLA QDPADQLLNT VPENFTNNIE YPQNNNNNTS 60
61 ETDESMDAEG EWVQSAPPEE IEEAKHL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-579] |
1 11 21 31 41 51
| | | | | |
1 LDPVHVDFEH THKPLAFVFL IILVTLAKPT LHWPVLRKLP ESVVLMLYGV LMATAVKALM 60
61 RIDPGQLDTF MFFMILLPAI VNDAGLSMQK KEFTIALPKI LLFAVVGTVV HALLLAATMY 120
121 GIEPIFSFKP GFLHLFVFAT LISAVDPVSV LSTFAELDVK KSLFILIFGE SLCNDAVTIV 180
181 LYRTSINVIK TSDASDEMLT ITSVVGSCVV QFMIVCGFGL LCGAVVGFAG VFIMKNMVGH 240
241 QMNQPIFQLF CPYLAYLLAE TGHYSGILAS ILCAAIMSYY MAANMCVEME FAAFTFSKTG 300
301 SSLSESCIFF YLGVSLVSYN HEFDFYFIAV TVFCCTLYRF LVTCTLSAFY NLFASEKNRI 360
361 PFTDQLVVTH AGIRGAVCFG LVQIIDERII PAKPYFVTTT LAMIFVTSIL QGCTIKFVMK 420
421 CLKIPGDDGT KQKDPKALRW LTHLNDKYIK KFLVSENTYL PTDETFRNLG LPKAVSTALR 480
481 IGERSHTDLQ RH
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 1fftA |
| Description: | Cytochrome O ubiquinol oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 6.67219472356299 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 5.36696570788676 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.97293291274237 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.88027604120114 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 4.56139688972524 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.48195996846249 | bayes_pls_golite062009 |
| transporter activity | 3.02642879486966 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.89692543447799 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.65243944674297 | bayes_pls_golite062009 |
| binding | 0.679485348721049 | bayes_pls_golite062009 |
| protein binding | 0.358081002328109 | bayes_pls_golite062009 |
| heme-copper terminal oxidase activity | 0.240598645883604 | bayes_pls_golite062009 |
|
Region A: Residues: [580-749] |
1 11 21 31 41 51
| | | | | |
1 GEVSHTPAPS VGRPTIAPFD FGNMEEENNR LPSTGRRTPV ARSQTRYSRH FIYAIPNETD 60
61 NYLTCPVSAS KRPPFDPSQV YQHQNTISNP GDDRARCYNR RHNSMSGADE MELKQLNQTV 120
121 QKKLSRTITS GTKQFVVNPD EAIREESPAT IPKKRATFED DEISKIDESE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
