| Protein: | nas-37 |
| Organism: | Caenorhabditis elegans |
| Length: | 765 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-37.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..1] | [765..1] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MKSQACLKVC LALIGLVSIV STAYIANDVV SDYAEVKELL AAFYRKHAKK YGHDYDPAAI 60
61 QAIAENMDKS VKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [74-193] |
1 11 21 31 41 51
| | | | | |
1 DKTEATVNRK LWNEVFENDI ILTLPQAESL LSESNSPRSR RQAHPDPRNF WPNLTISYEF 60
61 YGGEETWRQL IRSAIRHVEQ NVCFKFKENG GDRDGLRYYR GNGCWSNVGR VGGRQLVSIG 120
121
|
| Detection Method: | |
| Confidence: | 48.0 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [194-307] |
1 11 21 31 41 51
| | | | | |
1 YGCDSLGIVS HETLHALGLW HEQSRDDRDN FISIVADKIT RGTEGNFAKR TAANSDNLGQ 60
61 PYDLGSVMHY GAKSFAYDWS SDTIKTRDWR YQNTIGQRDG LSFKDAKMIN TRYC
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 2dw0A |
| Description: | No description for 2dw0A was found. |
|
Region A: Residues: [308-683] |
1 11 21 31 41 51
| | | | | |
1 SNVCQRSLPC LNEGYTDPNN CGRCRCPSGY GGTYCETVEY TSCGGSLTAS SSYKKIESGI 60
61 VQPDANCVWR IRNPGGNVEV MFDQVNFQCA DPCQSYVEVK YLSQKTSTGA RLCCSLPSVI 120
121 RSEGDDVIII LRGTPNTAVG WRGFTLKYRA IGGTPITPAT VRPTYATTTR PYWTRTASGW 180
181 IHIKNPPLYK PDGQIYTSDE QSAETKYSSE ELYDPSTFLS PSSSSASPAL LLPSDASPQR 240
241 PSAQEHDLSQ LSQNALTRPT PTTTVAPDTA SWSAWGEWSA CSQPCGGCGT KTRVRACYGG 300
301 NQVCPGSNLD RESCNAHACA KPKKGMICNG RLLLPCDLLA KLNFGSNNYL NPKLKQSGFA 360
361 RSSTLPLPRI SQRKPV
|
| Detection Method: | |
| Confidence: | 5.221849 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ErbB-2 class receptor binding | 2.43291483229075 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 2.14752073450101 | bayes_pls_golite062009 |
| binding | 2.14092582858845 | bayes_pls_golite062009 |
| protein binding | 1.87564165872234 | bayes_pls_golite062009 |
| receptor binding | 1.84697876356356 | bayes_pls_golite062009 |
| transcription factor binding | 0.89765738417424 | bayes_pls_golite062009 |
| signal transducer activity | 0.673391983395207 | bayes_pls_golite062009 |
| molecular transducer activity | 0.673391983395207 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.49319143757878 | bayes_pls_golite062009 |
| growth factor activity | 0.473340802107115 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.225989825753998 | bayes_pls_golite062009 |
| pattern binding | 0.0196006376432096 | bayes_pls_golite062009 |
|
Region A: Residues: [684-765] |
1 11 21 31 41 51
| | | | | |
1 FVNELEVHPP TERFLSSSTR RVKRQTANRF CEKRFIYQCP TALLTIQMEY KPDTQGTNDA 60
61 YFQQYPECCS GYTPRRGVCY KN
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 1w0rA |
| Description: | Solution structure of dimeric form of properdin by X-ray solution scattering and analytical ultracentrifugation |
Matching Structure (courtesy of the PDB): |
|
