| Protein: | lgc-27 |
| Organism: | Caenorhabditis elegans |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-27.
| Description | E-value | Query Range |
Subject Range |
|
|
314.0 | [0..51] | [427..269] |
|
Region A: Residues: [1-428] |
1 11 21 31 41 51
| | | | | |
1 MVEARWISLL LSLVTLSVAA YDIDCKWKSN ITDIEDVAHH KYQVLEECLF YKLTSDADRM 60
61 QDKSNALMML PPTVAAGETL EVQVLDGSIT EMWMNEVFKE MNINGFLKLS WKDRRLRWNP 120
121 EEWKTEVLRL KSMGRLWSPD INSDKLQTGS QSTDFVNYHD IQSNYNGNVT ARLEFRMKAQ 180
181 CQIDYTEYPN DRKHCCFNLQ SNLYKRYVRF IMEHEGAHEM LNTKNTKTNW HIDPMYTWIS 240
241 KMNQENDNRA ERLEVCVGVV RKSSTLAVEL TLPVLISALI LLLAPFFGKF NQQIYVKMFA 300
301 LLLQFLSFQF LAEKTPQLGF GDNIPKIYVF YAFTIGMTVL SLIATVMISA MSRVKRKVPP 360
361 AHRYTLLASL LNANLCCGSE EEPTTDGTSS KMSQDATSDW LQVHSALNNL SSILLIFIYI 420
421 IGAIVIAF
|
| Detection Method: |  |
| Confidence: | 68.69897 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
