| Protein: | ctn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 759 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-631] |
1 11 21 31 41 51
| | | | | |
1 MPSSNSVVPP FDARNLEIKT KSIEQTLIPL VTQITTLVNY KESYMASGKP KSERAMRAAL 60
61 KIGSAVEAAI ERFVCVGETI ADENADIQPE MYDACTEARL AGASMANLSC ACNDDPNSVV 120
121 DKAVLVRASR QLLSSVTRVL LLADRVLVKQ VLRAEDKIAF SLSRLESTRS FNDFVKVFAV 180
181 FGGEMVELAH RSGDRQHDLK SEKRKAQMSI ARTSLERLTM LLLTASKTYL RHPDCDSALQ 240
241 CRDGVFYQMK LSLELIAICV CDGILTTEKS RYIQDEPDMP IDIALQLTAN AAIKQLTEML 300
301 EMIRMTVRVG AGVRERIVSA LDALCQLTQD FTDSAYTPHH QREQILDFLE ECRFEMTNLI 360
361 QPDENEQLAA SGLEVTVERL NRRLKDLSKQ LQIVAMEQIS EVLRANEDQV LLSSMKACAV 420
421 SGDIDGVEKY MHKFREHADH MQEVCRLLHH ISITDALHVH TGHVERNMRA LAPLTILAGR 480
481 TLCVHPSSRI ARENLEVFCD TWGQAVNDLS RVAKESDVAA NGRVAAEKQA YMSLPRPGDQ 540
541 QKMAKVGLEM KLLTSEVDAE AEKWDEYAEN DIVKRAKAMS SMAYNMYLFT RGDGPLKTTH 600
601 DLFTQAEFFA EQANQMYRTV REFSYEVPGS A
|
| Detection Method: |  |
| Confidence: | 45.0 |
| Match: | 1st6A |
| Description: | Crystal structure of a cytoskeletal protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.47862012796505 | bayes_pls_golite062009 |
| protein binding | 2.02579891050608 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.07751635463993 | bayes_pls_golite062009 |
| cadherin binding | 0.801778192092067 | bayes_pls_golite062009 |
|
Region A: Residues: [632-759] |
1 11 21 31 41 51
| | | | | |
1 EKSDLSAILE RIPLHCQQLQ VMVKSPTVGK TATFGKVDSV IQETKNLMNE IAKLVTASFV 60
61 CATKYEIEFR GGSVNGRTGA DGLAPDTKHP TSRAADLFAP FRQQLIKHTH LGQNAACFGL 120
121 KPQKMRIR
|
| Detection Method: | |
| Confidence: | 11.30103 |
| Match: | 1rkeB |
| Description: | Human vinculin head (1-258) in complex with human vinculin tail (879-1066) |
Matching Structure (courtesy of the PDB): |
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