| Protein: | lgc-54 |
| Organism: | Caenorhabditis elegans |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-54.
| Description | E-value | Query Range |
Subject Range |
|
|
322.0 | [0..9] | [432..246] |
|
Region A: Residues: [1-435] |
1 11 21 31 41 51
| | | | | |
1 MEVFKQNLKK KLTQPNSPRE HSFPGEPAND TISQLVLRRL FDDNYNKNTV PLKTSATVVS 60
61 VEFGIQNIAQ VSEISASFTL DLLFSQIWHD PRLRFDHLTN CLQNLTLGYS MVEKLWTPNV 120
121 CFVNSKKTEI HSSPTPNIFL MIYPNGTVWV NYRLQVQSPC MVDLVLFPMD IMNCELIIES 180
181 YAYNAAKVKL NWREWQPVFS IAKSKLSDFT LYGLQWTKNS FEYAAGQWDQ VSSFCSLNCF 240
241 SKMDGFQLTV SLTFSRAYGF YILQMYIPTY SSVFLSFVSF WIDLKALPAR ITLGVSSLMA 300
301 LTFQYGNVAK NLPRVGYVKS IDVYMVLTTA FIFLTMIEVA FVCYLDSENN LRRKERQAEK 360
361 KKERVAVLQR KKDRKKNNYG ATTVTNANAA ESDLRSNYDE PFSQNGTTSH KISISRQANN 420
421 MFESLHALAQ FGTFK
|
| Detection Method: |  |
| Confidence: | 69.522879 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
