| Protein: | nhx-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 627 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhx-2.
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..17] | [623..67] |
|
Region A: Residues: [1-443] |
1 11 21 31 41 51
| | | | | |
1 MSYVGAECEE EEKEYPSRYP IAYFEWENVK IPMTICLWLI GASIAKIIFN LIPHLNELFP 60
61 DSALLIMIGL IIGIIFKLIG VNKNAFFLES EVFMLYLLPP LVFDAGYFMP ARQFFDNFGS 120
121 ILCFAMIGTS FNIVAIALSL WAISLTGLFS VETPLMHMLL FGSVAADVDP VAVIVIFEEL 180
181 KVNEVLFIAV FGESLLNDGV AVVLYRMFLT FSEIGTENLI TSDYINGGVS FLVVAFGGIG 240
241 IGLLFAFLTS LVTRFARDEE VKVLNSVFIL ILPYTCYLCG ELFGLSSIMA IVFCGAAMRQ 300
301 YCRENVDPDT VKATESFIKV LSLASETVIF VFLGLSTVSS NHHWDTSFIV LTVVFCLIYR 360
361 TLGVVVMCYF LNKYRLNKYT KVDQFIMAYG GLRGAIAYGL VVAIPDFIPG KNMFVTSCII 420
421 VIYFTVFLQG ITLKPIAEFL QVE
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 3.29601790030287 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.37005362941394 | bayes_pls_golite062009 |
| transporter activity | 2.27206061444828 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.08122979774613 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.76993243926717 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49938666401349 | bayes_pls_golite062009 |
| binding | 0.368477568387728 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.206030814887517 | bayes_pls_golite062009 |
|
Region A: Residues: [444-627] |
1 11 21 31 41 51
| | | | | |
1 KKNVHSKNMI EHIYSELIDT TMAGMEDIAG FKGHHWIRDS WNALNNNYLR PILVNKNNMK 60
61 EMDKTKLVRK YKHLVDEDAK KIARGDLNSN MVFTKALIEH TRSRTNTMID GVSSTSKIDF 120
121 TKHMKENFGV TVYDDHSTVP MTPTHLFQET TEVEYSVRSE INDNDGFEND GYESDESGSF 180
181 HERV
|
| Detection Method: | |
| Confidence: | 1.55 |
| Match: | 1jadA |
| Description: | C-terminal domain of PLC-beta |
Matching Structure (courtesy of the PDB): |
|
