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View Structure Prediction Details

Protein: acl-14
Organism: Caenorhabditis elegans
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acl-14.

Description E-value Query
Range
Subject
Range
acl-14 - status:Confirmed UniProt:O01882 protein_id:AAK71374.2
276.0 [0..1] [428..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDEQTQKLL DLANGQRFRP PGSRLVIEQG SFASRLWWLV KAPFRTLMCL SLVTIFFATY  60
   61 FGFMLPVMWA RTVWPRLYWF VEGKLYRWLQ SFIAYWGYTA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYDVYEYGDD VTTYYRDERV LMMCNHQSTA DVPTLMTVLQ NKGVASRKTL WLMDVMFRWT  60
   61 PFGIIGNNHG DYFIQQGKAT RDKELIRLKK HLHDVFWDRD RRWVILFPEG GFYYKRVESS 120
  121 QSYGKKNGFP HLLYTTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [238-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRMGAVQAIL EEVGPRTEDS DEPRERSNSK LKLLQDTVGA IREKKYVKDM FDDHIVFEIN  60
   61 TRPPIKYVLD VTIAYPNGIP LSLATFGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [326-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTREKCDIAV NYKIYDAAEV PFEDEEKLRD WMYEVYKEKD EMLARYYSTG EFNPGEKGTR  60
   61 IAFSWAKIIG MYGFWFGSFY AQYNVYSYLI TSIAKFLLFP FSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle