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View Structure Prediction Details

Protein: acl-14
Organism: Caenorhabditis elegans
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acl-14.

Description E-value Query
Range
Subject
Range
acl-14 - status:Confirmed UniProt:O01882 protein_id:AAK71374.2
276.0 [0..1] [428..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDEQTQKLL DLANGQRFRP PGSRLVIEQG SFASRLWWLV KAPFRTLMCL SLVTIFFATY  60
   61 FGFMLPVMWA RTVWPRLYWF VEGKLYRWLQ SFIAYWGYTA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYDVYEYGDD VTTYYRDERV LMMCNHQSTA DVPTLMTVLQ NKGVASRKTL WLMDVMFRWT  60
   61 PFGIIGNNHG DYFIQQGKAT RDKELIRLKK HLHDVFWDRD RRWVILFPEG GFYYKRVESS 120
  121 QSYGKKNGFP HLLYTTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [238-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRMGAVQAIL EEVGPRTEDS DEPRERSNSK LKLLQDTVGA IREKKYVKDM FDDHIVFEIN  60
   61 TRPPIKYVLD VTIAYPNGIP LSLATFGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [326-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTREKCDIAV NYKIYDAAEV PFEDEEKLRD WMYEVYKEKD EMLARYYSTG EFNPGEKGTR  60
   61 IAFSWAKIIG MYGFWFGSFY AQYNVYSYLI TSIAKFLLFP FSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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