| Protein: | oct-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oct-1.
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..1] | [568..1] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MSATKPPDFD FVLEQVGNYG TYQIVFFFII CLPTSLPSAF SAFNIPFVVG NPPHTCHIPE 60
61 GKEYLRPLTN DTQILSCKQY NETQINVFRA FTSAPVDTY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [100-568] |
1 11 21 31 41 51
| | | | | |
1 SDRISLVPCQ NGWDYDNSTY LDSLVTEFNL VCDQQAWIEI STTSFYVGSF IGNCLFGYVA 60
61 DKFGRRRSFF VILTVLIVCG TASSFAKDIE SFIILRFFTG LAFPALFQIP FIICMEFMGN 120
121 SGRIFSGLMT SLFFGAAMAL LGVVAMFIRR WRQLTFFCNA PFAFYIIYYF FLPESPRWSV 180
181 SVGKWADAKK QLKKIAKMNG KSNVDVDELV DSMKNHQNAA EEKETKRSHN VTDLFKTPNL 240
241 RRKTLIVTYI WVMNAIIYNG LTLNVSNLPV DDYWSFIING AVELPGYFVV WPLLQCAGRR 300
301 WTLAATMIVC GIGCVSAMFM PDGYPWLVAS ASFIGKFGVG SGFAVIYIFA GELYPTVVRA 360
361 IGMGMSSMVA GSGLLLAPHI VNLGKIVKIL PLLIMGLMAL SAGILTFFLP ETLGAPLPMT 420
421 IEDAENFGKK PEPDSGMFTQ AAKKRESQPL LEPHTPMDRR RRSSRLMNI
|
| Detection Method: | |
| Confidence: | 29.39794 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.31967711223954 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.94605227012838 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| organic anion transmembrane transporter activity | 3.3413526350788 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 3.21476253433572 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 2.87308506088228 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 2.87308506088228 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| binding | 1.89539096965643 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.47932844880848 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
