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View Structure Prediction Details

Protein: CE28975
Organism: Caenorhabditis elegans
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28975.

Description E-value Query
Range
Subject
Range
DBP2_YEAST - ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBP2 PE=...
DBP2 - Essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated m...
361.0 [0..18] [517..53]

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Predicted Domain #1
Region A:
Residues: [1-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHPWNTADA LDDSRVQVEH IDLVPPKYAN VLNFRSIKTR DYYFAMRDRH QQLGAVTSSK  60
   61 AETDKLNKHC EENTIMVDQD GVETPADYGT ERMVAHAIED HRLAANLQRI KVHILNAVQQ 120
  121 KSIQAIRDRR GLLVDAPTGI GKTYAFLIPA IEIALRERPL LTNISTTPSP TILILANTNS 180
  181 LVEQLFNRCE VLLGLIDMED IIPIRDIKIE KLVASYQFTK DQCDIAFCTM GKLKASIEDK 240
  241 TILLDNLKMM ILDESDKMID IACFGNDIDW VLDQLQEDVL RNLQSCFFSA SHNRNEDGSI 300
  301 ALTSRQSRML GENPWSLIHC PRLPGYITQR VIRIGGQRVN DIHSNPWIVK MNIICKLLDD 360
  361 DLKEMGSTKE GPWKHTIAIF CETVSRVIQV TMALRQMGYN FKPVCSSVLK QQQAITLNDL 420
  421 EFCNIHGVVC TNIMSRGIDV SSVKQTIIME MSTDFPSYMH RIGRVGRDGC GGRATVLIDE 480
  481 HHLFGGPMSN IIEQLCSFML ECEETLPNWL VEWLKLRQSL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.30103
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
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