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View Structure Prediction Details

Protein: ceeh-1
Organism: Caenorhabditis elegans
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ceeh-1.

Description E-value Query
Range
Subject
Range
gi|7505171 - gi|7505171|pir||T16527 hypothetical protein K02F3.6 - Caenorhabditis elegans
233.0 [0..1] [169..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFESIYIQC LNKFSKYKKF VCHTTCNCPN YKIIGYLLYF LCLCRPINCS LPLSRHDLAF  60
   61 GSFSYYLTMF LYRILVRLLQ FYYFVKFSAI LFLGFAVKGR SLFEKKQREK PNVLE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GWDSRYIKLK KVRLHYVQTG SDDKPLMLFI HGYPEFWYSW RFQLKEFADK YRCVAIDQRG  60
   61 YNLSDKPKHV DNYSIDELTG DIRDVIEGLG YDKAIVVAHD WGGLVAWQFA EQYPEMVDKL 120
  121 ICCNIPRPGS FRKRIYTSWS QFRKSWYMFF YQNEKIPEML CSADDMKMLE LCFRAKEIGI 180
  181 QNNKNFTDED LEAWKYSFSM NGASFKYPIN YYRNIFNAKK QQADLVLEMP TLIIWGTADG 240
  241 ALDIEAAVDS LNTLKQGTMK KIEGASHWVQ QDEPEMVNEH IKKFLNKYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.522879
Match: 1cqzA
Description: Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76673721118052 bayes_pls_golite062009
hydrolase activity 1.64928663394 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.647157802814698 bayes_pls_golite062009
carboxylesterase activity 0.0777997779852618 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle