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View Structure Prediction Details

Protein: CE28884
Organism: Caenorhabditis elegans
Length: 274 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28884.

Description E-value Query
Range
Subject
Range
gi|7495417 - gi|7495417|pir||T31746 hypothetical protein C05C8.1 - Caenorhabditis elegans
417.0 [0..1] [252..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANFTTENEL EDILHQMGHH IHDKNQFATF KNEIDNLLDR ELCLSDADED VMNESLFASL  60
   61 SVDPAAQFIR QERNFPTE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLNIQSPIVS RKRQGKRFIY ENVELQSDFD DESSNEYPER NLLVDRAWRS IHRAMETCNG  60
   61 ATETLKSISL DGSDIQERSS VDDEENIAES VSVGLSTETE QSELQKSSRP EKEVWTRNVL 120
  121 SLEPGRAPKK YDPVTRYHFY KSEWDRHPAP GEMRRLSLRW KVREFMLRHD VPRLNENNED 180
  181 WKANHDKDWS PRPYID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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