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View Structure Prediction Details

Protein: CE28884
Organism: Caenorhabditis elegans
Length: 274 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28884.

Description E-value Query
Range
Subject
Range
gi|7495417 - gi|7495417|pir||T31746 hypothetical protein C05C8.1 - Caenorhabditis elegans
417.0 [0..1] [252..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANFTTENEL EDILHQMGHH IHDKNQFATF KNEIDNLLDR ELCLSDADED VMNESLFASL  60
   61 SVDPAAQFIR QERNFPTE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLNIQSPIVS RKRQGKRFIY ENVELQSDFD DESSNEYPER NLLVDRAWRS IHRAMETCNG  60
   61 ATETLKSISL DGSDIQERSS VDDEENIAES VSVGLSTETE QSELQKSSRP EKEVWTRNVL 120
  121 SLEPGRAPKK YDPVTRYHFY KSEWDRHPAP GEMRRLSLRW KVREFMLRHD VPRLNENNED 180
  181 WKANHDKDWS PRPYID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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