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View Structure Prediction Details

Protein: CE28809
Organism: Caenorhabditis elegans
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28809.

Description E-value Query
Range
Subject
Range
gi|73984592 - gi|73984592|ref|XP_533739.2| PREDICTED: similar to Y71F9B.2 isoform 1 [Canis familiaris]
475.0 [0..3] [320..12]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEYRELISV LPLETVEYAF AYGSGAIQQQ NEDKSEKMVD FVIVTKNAQE FHRDNILKNP  60
   61 QHYSLLRLMG PKMIEKIQCN FAARVYYNTH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKVGKRKIKY GVISYENVKQ DLLDWRWIYI SGRLHKPVLE VIKPRQDMCD LVTENRRSAL  60
   61 HSSLLLLPES FTLKQLFHKI VGLSYTGDFR MVVGEDKNKI NKIVEGNYEE LLRVYEPLMN 120
  121 DDARLSVMSP AKLIQDGSTT AIYHRLNLLP SEVLNRIQKN MNRVQKRQRD AEEVIFSLAH 180
  181 RHDVAATVET AIGGIIRPVS LSQTAKNAFS AGVTRSIIYS MAKMSKFLKS K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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